hubmapconsortium / hra-workflows-runner

hra-workflows-runner: Pipeline to download, annotate, and summarize experimental data using hra-workflows
MIT License
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Add script to concatenate all dataset metadata for a dataset listing #23

Closed bherr2 closed 11 months ago

bherr2 commented 11 months ago

This could run somewhere around (or in) 40-summarize-results.sh. It will take the list of all datasets for a listing and concatenate all dataset.json files and generate a flat .csv file called dataset-metadata.csv. It should be placed in the raw-data in the dataset directory associated with it.