search

hubmapconsortium / hra-workflows-runner

hra-workflows-runner: Pipeline to download, annotate, and summarize experimental data using hra-workflows
MIT License
0 stars 0 forks source link

Need documentation on how to access Slurm output #28

Open andreasbueckle opened 10 months ago

andreasbueckle commented 10 months ago

@vickydaiya Can you please write up some documentation here on how to access Slurm outputs since they are not in the folder at https://github.com/hubmapconsortium/hra-workflows-runner/tree/main/slurm-output? You mentioned VS Code, A response in a comment here would suffice.

vickydaiya commented 10 months ago

In order to access slurm outputs, you need access to the HRA project. You can then log in to Quartz and if you go into the slurm-output directory from the workflows-runner directory, you will find log files

andreasbueckle commented 10 months ago

Note: Access to Quartz needs to be requested first,