Open mruffalo opened 2 years ago
From @jswelling:
Smoothing cell-by-gene matrix Epoch: checking the inputs ... Error in A %*% data.use : Cholmod error 'problem too large' at file ../Core/cholmod_sparse.c, line 89 Calls: runMagic -> %*% -> %*%
This can likely be addressed by splitting the matrix by subsets of cells, smoothing each piece, then concatenating -- unlike https://github.com/hubmapconsortium/sc-atac-seq-pipeline/issues/41.
From @jswelling:
This can likely be addressed by splitting the matrix by subsets of cells, smoothing each piece, then concatenating -- unlike https://github.com/hubmapconsortium/sc-atac-seq-pipeline/issues/41.