Improve reporting of too few cells passing filtering criteria

hubmapconsortium / sc-atac-seq-pipeline

ATAC-seq pipelines for HuBMAP

MIT License

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Improve reporting of too few cells passing filtering criteria #47

Open mruffalo opened 2 years ago

mruffalo commented 2 years ago

Various portions of the pipeline fail when too few cells pass filtering criteria, causing difficult-to-diagnose workflow failures. Make this friendlier.