Closed hughesadam87 closed 10 years ago
Actually, this seems to be an indexing error. ts.columns[0] returns a timespectra, but it doesn't have columns (ie treated like a series or something)
a=ts[ts.columns[0]] a.columns
06-14 17:49:47 ERROR pyuvvis.core.timespectra: Gold Nanoparticles in Water.plot() failed {See trace below}
Traceback (most recent call last):
File "/home/glue/Desktop/PYUVVIS/pyuvvis/pyuvvis/logger.py", line 228, in _wraps
return fcn(_args, _kwargs)
File "/home/glue/Desktop/PYUVVIS/pyuvvis/pyuvvis/core/timespectra.py", line 1092, in plot
return specplot(self, _args, _kwargs)
File "/home/glue/Desktop/PYUVVIS/pyuvvis/pyuvvis/plotting/basic_plots.py", line 183, in specplot
return _genplot(ts, xlabel, ylabel, title, pltkwds)
File "/home/glue/Desktop/PYUVVIS/pyuvvis/pyuvvis/plotting/basic_plots.py", line 81, in _genplot
pltkwargs['color'] = put._df_colormapper(ts, pltcolor, axis=0)#put.cmget(pltkwargs['color'])
File "/home/glue/Desktop/PYUVVIS/pyuvvis/pyuvvis/plotting/plot_utils.py", line 153, in _df_colormapper
print "FUCK YOU", df.columns, type(df)
File "/home/glue/Desktop/PYUVVIS/pyuvvis/pyuvvis/pandas_utils/metadframe.py", line 107, in getattr
raise AttributeError('Could not find attribute "%s" in %s or its underlying DataFrame'%(attr, self.class.name*))
AttributeError: Could not find attribute "columns" in TimeSpectra or its underlying DataFrame
Traceback (most recent call last):
File "/usr/lib/wingide4.1/src/debug/tserver/_sandbox.py", line 1539, in
If ts.columns[0] fix does not correct plotting, just use colormap from pandas instead of our own...
Fixed, now that Spectrum is being returned.
fails, but
works. Also failing is syntax of iloc[:, 0] and iloc[:, 0:1], both of which produce something at least with _df.
Issue seems to be in the colormapper actually.
ERROR:pyuvvis.core.timespectra:AuNPs Glass (good).plot() failed {See trace below}
Traceback (most recent call last): File "/home/glue/Desktop/PYUVVIS/pyuvvis/pyuvvis/logger.py", line 228, in _wraps return fcn(_args, _kwargs) File "/home/glue/Desktop/PYUVVIS/pyuvvis/pyuvvis/core/timespectra.py", line 1092, in plot return specplot(self, _args, _kwargs) File "/home/glue/Desktop/PYUVVIS/pyuvvis/pyuvvis/plotting/basic_plots.py", line 183, in specplot return _genplot(ts, xlabel, ylabel, title, **pltkwds) File "/home/glue/Desktop/PYUVVIS/pyuvvis/pyuvvis/plotting/basic_plots.py", line 81, in _genplot pltkwargs['color'] = put._df_colormapper(ts, pltcolor, axis=0)#put.cmget(pltkwargs['color']) File "/home/glue/Desktop/PYUVVIS/pyuvvis/pyuvvis/plotting/plot_utils.py", line 140, in _df_colormapper vmin=min(df.min(axis=axis)) TypeError: 'numpy.float64' object is not iterable An exception has occurred, use %tb to see the full traceback.
LogExit