To have lintr ignore any of these issues, add the appropriate lines of those shown below to lint_ignore.csv at the top-level of the repository:
filename,line_number,message,line
vignettes/introduction.Rmd,68,Variable and function name style should be camelCase.,"rhyLimmaSummary[, adj.P.Val := p.adjust(P.Value, method = 'BH')]"
vignettes/introduction.Rmd,86,Variable and function name style should be camelCase.,"drLimma[, adj.P.Val := p.adjust(P.Value, method = 'BH')]"
vignettes/introduction.Rmd,104,Variable and function name style should be camelCase.,"deLimma[, adj.P.Val := p.adjust(P.Value, method = 'BH')]"
vignettes/introduction.Rmd,126,Variable and function name style should be camelCase.,"df[, sample_id := colnames(y[geneIdsNow, ])]"
To have lintr ignore any of these issues, add the appropriate lines of those shown below to lint_ignore.csv at the top-level of the repository: