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mCP
mini-Complexome Profiler
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Compare different experimental units
#2
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phit0
opened
2 years ago
phit0
commented
2 years ago
[ ] Function that accepts
mCP
results of two experimental units from the function
ccp_plotter
[ ] Filter for identical protein complexes
[ ] For all matching complexes correlate proteins of both units and report those with less than 0.93 pearson correlation beteween unit 1 and 2.
[x] Make a plot of the reported proteins
[x] Deliver a table of protein candidates that deviate
Table example:
Complex Name
ID of affected protein
correlation
Calcium Handling Complex
atp1a1
0.8
Table 2:
[ ] make a list of complexes that is not found in both
Complex Name
Found only in Experimental Unit
Calcium Handling Complex
Mouse 1
mCP
results of two experimental units from the functionccp_plotter
Table 2: