humlab-sead / sead_bugs_import

SEAD bugs import
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Missing bibliographic references #12

Closed roger-mahler closed 4 years ago

roger-mahler commented 5 years ago

The import system reports a number of unknown bibliographic references

with bugs_values as (
    select string_to_array(translate(bugs_data, '{}', ''), ',') as data
    from bugs_import.bugs_errors
    where TRUE
      and message = 'No reference found'
) select distinct data[5]
  from bugs_values

Result:

Johnson 2003a   1
Böhme 2005  855
Böcher 1988 4
Hoskovec & Rejzek 1997  1
Aalto et al. (1984) 1
roger-mahler commented 5 years ago

A search in the bibliographic reference table gives potential candidate matches:

Johnson 2003a: (tbl_biblio.bugs_reference 'Johnson 2003' exists, lots of other Johnsons)
Böhme 2005: (tbl_biblio.bugs_reference 'Bohme 2005' exists)
Böcher 1988: (tbl_biblio.bugs_reference 'Bocher 1988' exists)
Hoskovec & Rejzek 1997:  Hoskovec M., Rejzek M. (1997-2012) West Palaearctic Cerambycidae????
Aalto et al. (1984): (tbl_biblio.bugs_reference 'Aalto et al (1984)' exists)
visead commented 5 years ago

These are correct mappings: Böhme 2005: (tbl_biblio.bugs_reference 'Bohme 2005' exists) Böcher 1988: (tbl_biblio.bugs_reference 'Bocher 1988' exists) Aalto et al. (1984): (tbl_biblio.bugs_reference 'Aalto et al (1984)' exists)

visead commented 5 years ago

Need to know which Bugs table is providing the unmapped references. Not found in TBiblio.

roger-mahler commented 5 years ago

Specify where from which table the affected Bugs-data is from.

roger-mahler commented 5 years ago
2986    TSynonym    {47.0040034,Simplocaria,frigida,Krog.,Böcher 1988,null}     No reference found  2019-05-07 14:13:51.697156+02   {47.0040034,Simplocaria,frigida,Krog.,Böcher 1988,null}
2987    TSynonym    {47.0040034,Simplocaria,remota,Brown,Böcher 1988,null}      No ```
reference found 2019-05-07 14:13:51.773048+02   {47.0040034,Simplocaria,remota,Brown,Böcher 1988,null}
2984    TSynonym    {23.1601021,Atheta,hyperborea,Brundin,Böcher 1988,null}     No reference found  2019-05-07 14:12:23.504689+02   {23.1601021,Atheta,hyperborea,Brundin,Böcher 1988,null}
2985    TSynonym    {23.1881365,Atheta,fungi,of other Greenland auctt.,Böcher 1988,null}        No reference found  2019-05-07 14:12:47.761103+02   {23.1881365,Atheta,fungi,of other Greenland auctt.,Böcher 1988,null}
2988    TSynonym    {21.019003,Acrotrichis,chevrolati,auctt. Misspelling,Johnson 2003a,null}        No reference found  2019-05-07 14:18:27.520409+02   {21.019003,Acrotrichis,chevrolati,auctt. Misspelling,Johnson 2003a,null}
2990    TSynonym    {23.1040675,Quedius,boops,of Greenland list,Böcher 1988,null}       No reference found  2019-05-07 14:26:24.572729+02   {23.1040675,Quedius,boops,of Greenland list,Böcher 1988,null}
2996    TSynonym    {83.040001,Cylindronotus,null,auctt partim (misspelling),Aalto et al. (1984),null}      No reference found  2019-05-07 14:32:49.994493+02   {83.040001,Cylindronotus,null,auctt partim (misspelling),Aalto et al. (1984),null}
roger-mahler commented 5 years ago

@visead bump

visead commented 4 years ago

Corrected in 2020-01-07 Bugsdata file.