Closed nanfang0422 closed 5 years ago
hvasbath
commented
5 years ago Hi Nan!
Thanks a lot for reporting! There is an issue in the Tutorial, I will update it. There is not supposed to be any geodetic_data.pkl. While cloning the sample directory please run: beat clone FullMT /'model path'/FullMT --copy_data --datatypes=seismic
Instead of what is written in the tutorial now: beat clone FullMT /'model path'/FullMT --copy_data
Best regards! Hannes
P.S.: THe Tutorial is updated now.
nanfang0422
commented
5 years ago Thank you very much. I can run it successfully. But I meet another problem in the next step.
fangnandeMacBook-Pro:beat_learning NAN$ beat sample FullMT --hypers config - INFO All parameter-priors ok! config - INFO All hyper-parameters ok! config - INFO All hierarchical-parameters ok! models - INFO ... Initialising Geometry Optimizer ...
models - INFO Analysing problem ... models - INFO ---------------------
heart - INFO Consistent number of datasets and targets in any_P_0 wavemap! heart - INFO Number of seismic datasets for wavemap: any_P_0: 20 seismic - INFO The waveform defined in "slowest 1" config is not included in the optimization! models - INFO ... Building Hyper model ...
Traceback (most recent call last):
File "/anaconda3/bin/beat", line 11, in
In my config_geometry.yaml, the hyperparameters are: hyperparameters: h_any_P_0_Z: !beat.heart.Parameter name: h_any_P_0_Z form: Uniform lower: [0.0] upper: [5.0] testvalue: [2.0] h_any_P_1_T: !beat.heart.Parameter name: h_any_P_1_T form: Uniform lower: [0.0] upper: [6.0] testvalue: [3.0]
I try to update the conifguration: fangnandeMacBook-Pro:beat_learning NAN$ beat update FullMT --parameters='hypers, hierarchicals' config - INFO Added hyperparameter h_any_P_0_Z to config and model setup! config - INFO Added hyperparameter h_any_P_0_T to config and model setup! config - INFO All hyper-parameters ok! config - INFO Number of hyperparameters! 2 config - INFO All hierarchical-parameters ok! config - INFO Number of hierarchicals! 0 upgrade - INFO Updated hyper parameters! Previous hyper parameter bounds are invalid now! upgrade - INFO Updated hierarchicals.
Then, I run the code again: fangnandeMacBook-Pro:beat_learning NAN$ beat sample FullMT --hypers config - INFO All parameter-priors ok! config - INFO All hyper-parameters ok! config - INFO All hierarchical-parameters ok! models - INFO ... Initialising Geometry Optimizer ...
models - INFO Analysing problem ... models - INFO ---------------------
heart - INFO Consistent number of datasets and targets in any_P_0 wavemap! heart - INFO Number of seismic datasets for wavemap: any_P_0: 20 seismic - INFO The waveform defined in "slowest 1" config is not included in the optimization! models - INFO ... Building Hyper model ...
Traceback (most recent call last):
File "/anaconda3/bin/beat", line 11, in
Can you give me some suggestions? Thank you very much.
hvasbath
commented
5 years ago Next time please open a new issue! Unfortunately I cannot reproduce your issue. Please run again: beat update FullMT --parameters=hypers,hierarchicals
Without editing anything in the file please try sampling the hyperparameters now. beat sample FullMT --hypers
If this does not work I will need to see your full config file. Best would be if you send it via email. Thanks for reporting!
nanfang0422
commented
5 years ago Sorry, I will remember to open a new issue when I meet new problems. Thank you for your suggestions! I have run the code you suggested again and it did work. Now I can run the whole scenario 0. I don't know where that problem comes and I will check it again. The attachment is my BEAT_log.txt. BEAT_log.txt
Hi, Hannes
I met a problem when I was running scenario 0. When I type "beat check FullMT --what='traces'", it appears the error: fangnandeMacBook-Pro:beat_learning NAN$ beat check FullMT --what='traces' config - INFO All parameter-priors ok! config - INFO All hyper-parameters ok! config - INFO All hierarchical-parameters ok! models - INFO ... Initialising Geometry Optimizer ...
models - INFO Analysing problem ... models - INFO ---------------------
Traceback (most recent call last): File "/anaconda3/lib/python3.6/site-packages/beat-1.0rc1-py3.6-macosx-10.7-x86_64.egg/beat/utility.py", line 871, in load_objects objects = pickle.load(open(loadpath, 'rb')) FileNotFoundError: [Errno 2] No such file or directory: '/Users/NAN/Documents/beat_learning/FullMT/geodetic_data.pkl'
During handling of the above exception, another exception occurred:
Traceback (most recent call last): File "/anaconda3/bin/beat", line 11, in
load_entry_point('beat==1.0rc1', 'console_scripts', 'beat')()
File "/anaconda3/lib/python3.6/site-packages/beat-1.0rc1-py3.6-macosx-10.7-x8664.egg/beat/apps/beat.py", line 1588, in main
globals()['command' + command](args)
File "/anaconda3/lib/python3.6/site-packages/beat-1.0rc1-py3.6-macosx-10.7-x86_64.egg/beat/apps/beat.py", line 1350, in command_check
project_dir, options.mode, hypers=False, build=False)
File "/anaconda3/lib/python3.6/site-packages/beat-1.0rc1-py3.6-macosx-10.7-x86_64.egg/beat/models/problems.py", line 824, in load_model
problem = problem_catalog[pc.mode](config, hypers)
File "/anaconda3/lib/python3.6/site-packages/beat-1.0rc1-py3.6-macosx-10.7-x86_64.egg/beat/models/problems.py", line 618, in init
hypers)
File "/anaconda3/lib/python3.6/site-packages/beat-1.0rc1-py3.6-macosx-10.7-x86_64.egg/beat/models/geodetic.py", line 432, in init
gc, project_dir, sources, event, hypers=hypers)
File "/anaconda3/lib/python3.6/site-packages/beat-1.0rc1-py3.6-macosx-10.7-x86_64.egg/beat/models/geodetic.py", line 335, in init
gc, project_dir, event, hypers=hypers)
File "/anaconda3/lib/python3.6/site-packages/beat-1.0rc1-py3.6-macosx-10.7-x86_64.egg/beat/models/geodetic.py", line 87, in init
self.datasets = utility.load_objects(geodetic_data_path)
File "/anaconda3/lib/python3.6/site-packages/beat-1.0rc1-py3.6-macosx-10.7-x86_64.egg/beat/utility.py", line 876, in load_objects
'File %s does not exist!' % loadpath)
Exception: File /Users/NAN/Documents/beat_learning/FullMT/geodetic_data.pkl does not exist!
I don't know where the geodetic_data.pkl file is. Can you give me some suggestions? Thank you very much.