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hybridLambda / hybrid-Lambda

Hybrid-Lambda is a software package that can simulate gene trees within a rooted species network or a rooted species tree under the Kingman's coalescent or Lambda coalescent process.
http://hybridlambda.github.io/
GNU General Public License v3.0
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tree topology distribution #24

Closed shajoezhu closed 7 years ago

shajoezhu commented 7 years ago

I think this is ok

$./hybrid-Lambda -spng "((t1:1000,t2:1000)int:1000,t3:2000);" -pop "((t1:1000,t2:1000)int:2000,t3:1000)r:2000;" -sim_num_gener -num 10000 -o sim -f

$cat sim_frequencies 
1 ((t1_1,t2_1),t3_1);  5982
2 ((t3_1,t2_1),t1_1);  2051
3 (t2_1,(t3_1,t1_1));  1967