Closed LarissaHolm closed 2 years ago
mandjevant
commented
2 years ago Hey there!
The pipy package might not be up to date. Could you try installing it like it's mentioned in the Readme?
pip install git+https://github.com/hyperopt/hyperopt-sklearn
Let me know if you run into any issues!
LarissaHolm
commented
2 years ago Thank you for the fast response! I already tried that and the result remains the same even after restarting the runtime.
ModuleNotFoundError Traceback (most recent call last)
/usr/local/lib/python3.7/dist-packages/hpsklearn/init.py in
ModuleNotFoundError: No module named 'hpsklearn.estimator'
PhilippEberl
commented
2 years ago I have the exact same error, nothing seems to fix it.
mandjevant
commented
2 years ago I see, I get this error too when I'm installing in Jupyter. Looking at the package it installed, it only downloads the __init__ file.
I apologize for this oversight and aim to fix the issue and come with a solution within 48 hours.
Bouchenemehdi24
commented
2 years ago I have the same issue. Iam working with Google colab and after the end of the installation i have the following message: ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. albumentations 0.1.12 requires imgaug<0.2.7,>=0.2.5, but you have imgaug 0.2.9 which is incompatible.
After from hpsklearn import HyperoptEstimator
ModuleNotFoundError: No module named 'hpsklearn.estimator'
Thanks in advance.
mandjevant
commented
2 years ago @LarissaHolm @PhilippEberl @Bouchenemehdi24 Thank you for raising this issue. I determined what the mistake was and I suggested a fix in #186
When it gets merged (maximum 24 hours) I will close this issue.
If you require to use hpsklearn right now, please use pip install git+https://github.com/mandjevant/hyperopt-sklearn.
This has the fix and should work now.
Once again my apologies.
LarissaHolm
commented
2 years ago Hello @mandjevant Thank you very much! I just tried the way you suggested, but am still getting the same error message in Colab:
!pip install git+https://github.com/mandjevant/hyperopt-sklearn from hpsklearn import HyperoptEstimator from hpsklearn import any_classifier from hpsklearn import any_preprocessing from hyperopt import tpe
ModuleNotFoundError Traceback (most recent call last)
/usr/local/lib/python3.7/dist-packages/hpsklearn/init.py in
ModuleNotFoundError: No module named 'hpsklearn.estimator'
Is it a mistake I'm making or should I wait until the merge is complete?
mandjevant
commented
2 years ago You should probably manually remove the current hpsklearn directory and it's dist- directory. @LarissaHolm
On windows it's in C:/Users/<Username>/Anaconda3/Envs/<EnvName>/Lib/site-packages/hpsklearn
mandjevant
commented
2 years ago Hey @LarissaHolm I just noticed I misread Colab as Conda.
I do think you must uninstall the previously installed hpsklearn module.
I have just tested running !pip install git+https://github.com/mandjevant/hyperopt-sklearn on a clean google colab notebook and it runs without problems.
PhilippEberl
commented
2 years ago @mandjevant Thanks for the quick fix, though now I get a new error
3 import matplotlib.pyplot as plt
5 from hyperopt import tpe
----> 6 from hpsklearn import HyperoptEstimator, k_neighbors_regressor, linear_svr
7 from sklearn.model_selection import cross_val_score, train_test_split
File /opt/homebrew/Caskroom/miniforge/base/envs/tensorflow/lib/python3.9/site-packages/hpsklearn/__init__.py:1, in <module>
----> 1 from .estimator import hyperopt_estimator as HyperoptEstimator
2 from .components import * # noqa
3 from .components.multiclass import \
4 one_vs_rest_classifier, \
5 one_vs_one_classifier, \
6 output_code_classifier
File /opt/homebrew/Caskroom/miniforge/base/envs/tensorflow/lib/python3.9/site-packages/hpsklearn/estimator/__init__.py:1, in <module>
----> 1 from .estimator import hyperopt_estimator
File /opt/homebrew/Caskroom/miniforge/base/envs/tensorflow/lib/python3.9/site-packages/hpsklearn/estimator/estimator.py:14, in <module>
12 import scipy.sparse
13 import numpy as np
---> 14 import numpy.typing as npt
15 import pathlib
16 import inspect
File /opt/homebrew/Caskroom/miniforge/base/envs/tensorflow/lib/python3.9/site-packages/numpy/typing/__init__.py:324, in <module>
311 from ._scalars import (
312 _CharLike_co,
313 _BoolLike_co,
(...)
321 _VoidLike_co,
322 )
323 from ._shape import _Shape, _ShapeLike
--> 324 from ._dtype_like import (
325 DTypeLike as DTypeLike,
326 _SupportsDType,
327 _VoidDTypeLike,
328 _DTypeLikeBool,
329 _DTypeLikeUInt,
330 _DTypeLikeInt,
331 _DTypeLikeFloat,
332 _DTypeLikeComplex,
333 _DTypeLikeTD64,
334 _DTypeLikeDT64,
335 _DTypeLikeObject,
336 _DTypeLikeVoid,
337 _DTypeLikeStr,
338 _DTypeLikeBytes,
339 _DTypeLikeComplex_co,
340 )
341 from ._array_like import (
342 ArrayLike as ArrayLike,
343 _ArrayLike,
(...)
358 _ArrayLikeBytes_co,
359 )
360 from ._generic_alias import (
361 NDArray as NDArray,
362 _DType,
363 _GenericAlias,
364 )
File /opt/homebrew/Caskroom/miniforge/base/envs/tensorflow/lib/python3.9/site-packages/numpy/typing/_dtype_like.py:16, in <module>
13 import numpy as np
15 from ._shape import _ShapeLike
---> 16 from ._generic_alias import _DType as DType
18 from ._char_codes import (
19 _BoolCodes,
20 _UInt8Codes,
(...)
57 _ObjectCodes,
58 )
60 _DTypeLikeNested = Any # TODO: wait for support for recursive types
File /opt/homebrew/Caskroom/miniforge/base/envs/tensorflow/lib/python3.9/site-packages/numpy/typing/_generic_alias.py:211, in <module>
208 ScalarType = TypeVar("ScalarType", bound=np.generic, covariant=True)
210 if TYPE_CHECKING or sys.version_info >= (3, 9):
--> 211 _DType = np.dtype[ScalarType]
212 NDArray = np.ndarray[Any, np.dtype[ScalarType]]
213 else:
TypeError: 'type' object is not subscriptableI uninstalled the old version a did a reinstall with the new one, but maybe I am doing something wrong.
mandjevant
commented
2 years ago Hey @PhilippEberl I'm quite certain you should update numpy to fix this issue. Could you let me know what your current numpy version is?
PhilippEberl
commented
2 years ago @mandjevant I run on numpy v1.22.1
mandjevant
commented
2 years ago @mandjevant I run on numpy v1.22.1
I personally do not experience any problems with hpsklearn or numpy in v1.22.1 or other versions.
I am confused as to why you get this error. I'd like to help you fix it.
Could you try removing your entire environment, then starting with a clean environment and see if you still get any issues?
If you do have the same issue, could you give me
pip listWith this information I can try and replicate your computer 1:1 to see if the issue is perhaps platform-specific.
Thank you and good luck!
PhilippEberl
commented
2 years ago @mandjevant I run on numpy v1.22.1
I personally do not experience any problems with
hpsklearnornumpyin v1.22.1 or other versions. I am confused as to why you get this error. I'd like to help you fix it.Could you try removing your entire environment, then starting with a clean environment and see if you still get any issues?
If you do have the same issue, could you give me
- The
pip list- And your OS and current version
With this information I can try and replicate your computer 1:1 to see if the issue is perhaps platform-specific.
Thank you and good luck!
I reinstalled all required packages, including hpsklearn and now the issue is resovled. All notebooks run normally.
Thanks!
mandjevant
commented
2 years ago Glad to hear this, thanks for letting me know @PhilippEberl
Hello everyone, I'm trying to use Hyperopt-Sklearn in Google Colab. However, after using "!pip install hpsklearn", I get the following error message when trying to import the estimator through "from hpsklearn import HyperoptEstimator": ModuleNotFoundError Traceback (most recent call last)()
1 get_ipython().system('pip install hpsklearn')
----> 2 from hpsklearn import HyperoptEstimator
3 from hpsklearn import any_classifier
4 from hpsklearn import any_preprocessing
5 from hyperopt import tpe
/usr/local/lib/python3.7/dist-packages/hpsklearn/init.py in()
----> 1 from .estimator import hyperopt_estimator as HyperoptEstimator
2 from .components import * # noqa
3 from .components.multiclass import \
4 one_vs_rest_classifier, \
5 one_vs_one_classifier, \
ModuleNotFoundError: No module named 'hpsklearn.estimator'
I have also tried loading the Estimator by accessing the github through "!pip install git+https://github.com/hyperopt/hyperopt-sklearn", but get the same error message.
I have the following packages/libraries installed before trying to work with Hyperopt: !pip install imgaug==0.2.5 !pip install --upgrade scipy !pip install --upgrade sklearn !sudo apt-get install build-essential swig !pip install auto-sklearn import autosklearn.classification import autosklearn.regression import numpy as np import random import pandas as pd import sklearn.datasets import sklearn.metrics import scipy import matplotlib.pyplot as plt import csv import pprint as pprint from sklearn.model_selection import train_test_split from sklearn.model_selection import RepeatedKFold from sklearn.model_selection import RepeatedStratifiedKFold
Is anybody else having this issue and if so, is there a solution or workaround? I'm fairly new to AutoML and its programming.