jinglong485
commented
5 years ago Also when I load dm4 file it rises error as following, this error can be repeated on Windows with same error. Traceback (most recent call last): File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/hyperspyui/mainwindowhyperspy.py", line 527, in load sig.plot() File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/hyperspy/_signals/signal2d.py", line 324, in plot *kwargs File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/hyperspyui/hooksignal.py", line 33, in plot r = super(HookedSignal, self).plot(args, kwargs) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/hyperspy/signal.py", line 2077, in plot self._plot.plot(kwargs) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/hyperspy/drawing/mpl_he.py", line 176, in plot self.plot_signal(kwargs) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/hyperspy/drawing/mpl_hie.py", line 91, in plot_signal imf.plot(kwargs) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/hyperspy/drawing/image.py", line 258, in plot self.create_figure() File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/hyperspy/drawing/image.py", line 240, in create_figure super().create_figure(kwargs) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/hyperspy/drawing/figure.py", line 57, in create_figure else None, kwargs) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/hyperspy/drawing/utils.py", line 130, in create_figure fig = plt.figure(kwargs) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/matplotlib/pyplot.py", line 539, in figure kwargs) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/hyperspyui/mdi_mpl_backend.py", line 132, in new_figure_manager return new_figure_manager_given_figure(num, thisFig) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/hyperspyui/mdi_mpl_backend.py", line 140, in new_figure_manager_given_figure canvas = FigureCanvas(figure) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/matplotlib/backends/backend_qt5agg.py", line 21, in init super().init(figure=figure) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/matplotlib/backends/backend_qt5.py", line 226, in init super().init(figure=figure) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/matplotlib/backend_bases.py", line 1582, in init self._fix_ipython_backend2gui() File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/matplotlib/backend_bases.py", line 1629, in _fix_ipython_backend2gui ip.enable_matplotlib() File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/ipykernel/inprocess/ipkernel.py", line 183, in enable_matplotlib return super(InProcessInteractiveShell, self).enable_matplotlib(gui) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/IPython/core/interactiveshell.py", line 3384, in enable_matplotlib pt.activate_matplotlib(backend) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/IPython/core/pylabtools.py", line 314, in activate_matplotlib matplotlib.pyplot.switch_backend(backend) File "/Users/jinglong/.pyenv/versions/3.7.3/lib/python3.7/site-packages/matplotlib/pyplot.py", line 230, in switch_backend newbackend, required_framework, current_framework)) ImportError: Cannot load backend 'Qt4Agg' which requires the 'qt4' interactive framework, as 'qt5' is currently running
ericpre
--- Things that should normally be included in a new issue: ---
I install hyperspyui with pyenv using pip. It works fine but the terminal pops up one error, the same error also happens in my windows machine.
Steps to reproduce
pip install hyperspy[all] pip install hyperspyui python -m hyperspyui
Error log
INFO:hyperspy.io_plugins.bruker:The fast cython based bcf unpacking library were found INFO:hyperspy.io_plugins:The Signal2D (PIL) IO features are not available DEBUG:hyperspyui:Loading HyperSpy signals... DEBUG:hyperspyui:Initializing plugins /Users/jinglong/.pyenv/versions/3.7.2/Python.framework/Versions/3.7/lib/python3.7/site-packages/hyperspyui/plugins/moviesaver.py:41: UserWarning: MovieWriter ffmpeg unavailable warnings.warn("MovieWriter %s unavailable" % writer) /Users/jinglong/.pyenv/versions/3.7.2/Python.framework/Versions/3.7/lib/python3.7/site-packages/hyperspyui/pluginmanager.py:130: RuntimeWarning: Exception in import of hyperspyui plugin "eelsdb" error: ImportError: QtWebEngineWidgets must be imported before a QCoreApplication instance is created
During handling of the above exception, another exception occurred:
Traceback (most recent call last): File "/Users/jinglong/.pyenv/versions/3.7.2/Python.framework/Versions/3.7/lib/python3.7/site-packages/hyperspyui/pluginmanager.py", line 127, in discover import('hyperspyui.plugins.' + plug, globals()) File "/Users/jinglong/.pyenv/versions/3.7.2/Python.framework/Versions/3.7/lib/python3.7/site-packages/hyperspyui/plugins/eelsdb.py", line 26, in
from qtpy import QtCore, QtNetwork, QtWidgets, QtWebEngineWidgets
File "/Users/jinglong/.pyenv/versions/3.7.2/Python.framework/Versions/3.7/lib/python3.7/site-packages/qtpy/QtWebEngineWidgets.py", line 26, in
from PyQt5.QtWebKitWidgets import QWebPage as QWebEnginePage
ModuleNotFoundError: No module named 'PyQt5.QtWebKitWidgets'
self.warn("import", plug) DEBUG:hyperspyui:Found plugins: [<class 'hyperspyui.plugins.align.AlignPlugin'>, <class 'hyperspyui.plugins.alignzlp.Alignzlp'>, <class 'hyperspyui.plugins.axesconf.AxesConf'>, <class 'hyperspyui.plugins.axesorderwidget.AxesOrderPlugin'>, <class 'hyperspyui.plugins.basicsignal.BasicSignalPlugin'>, <class 'hyperspyui.plugins.basicspectrum.BasicSpectrumPlugin'>, <class 'hyperspyui.plugins.cmappicker.CMapPickerPlugin'>, <class 'hyperspyui.plugins.croptool.CropToolPlugin'>, <class 'hyperspyui.plugins.dmannotations.DmAnnotations'>, <class 'hyperspyui.plugins.fft.FFT_Plugin'>, <class 'hyperspyui.plugins.fitting.FittingPlugin'>, <class 'hyperspyui.plugins.gaussianfilter.GaussianFilter'>, <class 'hyperspyui.plugins.imagerotation.ImageRotation_Plugin'>, <class 'hyperspyui.plugins.linemeasure.LineMeasure'>, <class 'hyperspyui.plugins.mva.MVA_Plugin'>, <class 'hyperspyui.plugins.metadataeditor.MetadataEditor'>, <class 'hyperspyui.plugins.mirrorplot.MirrorPlotPlugin'>, <class 'hyperspyui.plugins.moviesaver.MovieSaver'>, <class 'hyperspyui.plugins.plotutils.PlotUtils'>, <class 'hyperspyui.plugins.rebin.RebinPlugin'>, <class 'hyperspyui.plugins.recorderwidget.RecorderWidgetPlugin'>, <class 'hyperspyui.plugins.dataastext.SaveDataAsText'>, <class 'hyperspyui.plugins.segmentation.Segmentation'>, <class 'hyperspyui.plugins.stylesheet.StylePlugin'>, <class 'hyperspyui.plugins.tightlayout.Tightlayout'>, <class 'hyperspyui.plugins.gitgetter.GitSelector'>, <class 'hyperspyui.plugins.virtual_aperture.VirtualBfDf'>] DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.align.AlignPlugin'> DEBUG:hyperspyui:Plugin loaded: Align DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.alignzlp.Alignzlp'> DEBUG:hyperspyui:Plugin loaded: AlignZLP DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.axesconf.AxesConf'> DEBUG:hyperspyui:Plugin loaded: Axes Configuration DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.axesorderwidget.AxesOrderPlugin'> DEBUG:hyperspyui:Plugin loaded: Axes order widget DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.basicsignal.BasicSignalPlugin'> DEBUG:hyperspyui:Plugin loaded: Basic signal tools DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.basicspectrum.BasicSpectrumPlugin'> DEBUG:hyperspyui:Plugin loaded: Basic spectrum tools DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.cmappicker.CMapPickerPlugin'> DEBUG:hyperspyui:Plugin loaded: Color map picker DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.croptool.CropToolPlugin'> DEBUG:hyperspyui:Plugin loaded: Crop tool DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.dmannotations.DmAnnotations'> DEBUG:hyperspyui:Plugin loaded: DM Annotations DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.fft.FFT_Plugin'> DEBUG:hyperspyui:Plugin loaded: FFT DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.fitting.FittingPlugin'> DEBUG:hyperspyui:Plugin loaded: Fitting plugin DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.gaussianfilter.GaussianFilter'> DEBUG:hyperspyui:Plugin loaded: Gaussian Filter DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.imagerotation.ImageRotation_Plugin'> DEBUG:hyperspyui:Plugin loaded: Image Rotation DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.linemeasure.LineMeasure'> DEBUG:hyperspyui:Plugin loaded: LineMeasure DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.mva.MVA_Plugin'> DEBUG:hyperspyui:Plugin loaded: MVA DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.metadataeditor.MetadataEditor'> DEBUG:hyperspyui:Plugin loaded: Metadata Editor DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.mirrorplot.MirrorPlotPlugin'> DEBUG:hyperspyui:Plugin loaded: Mirror plot DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.moviesaver.MovieSaver'> DEBUG:hyperspyui:Plugin loaded: Movie Saver DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.plotutils.PlotUtils'> DEBUG:hyperspyui:Plugin loaded: Plot utils DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.rebin.RebinPlugin'> DEBUG:hyperspyui:Plugin loaded: Rebin DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.recorderwidget.RecorderWidgetPlugin'> DEBUG:hyperspyui:Plugin loaded: Recorder Widget DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.dataastext.SaveDataAsText'> DEBUG:hyperspyui:Plugin loaded: Save data as text DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.segmentation.Segmentation'> DEBUG:hyperspyui:Plugin loaded: Segmentation DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.stylesheet.StylePlugin'> DEBUG:hyperspyui:Plugin loaded: Style DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.tightlayout.Tightlayout'> DEBUG:hyperspyui:Plugin loaded: TightLayout DEBUG:hyperspyui:Initializing plugin: <class 'hyperspyui.plugins.virtual_aperture.VirtualBfDf'> DEBUG:hyperspyui:Plugin loaded: Virtual BF/DF DEBUG:hyperspyui:Creating default actions DEBUG:hyperspyui:Creating plugin actions DEBUG:hyperspyui:Creating console DEBUG:hyperspyui:Creating menus DEBUG:hyperspyui:Creating toolbars DEBUG:hyperspyui:Creating widgets INFO:hyperspyui:Main window loaded!