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hyunhwan-jeong / SalmonTE

SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances
GNU General Public License v3.0
81 stars 23 forks source link

Bioconda support #13

Open bgruening opened 6 years ago

bgruening commented 6 years ago

To make it easier to install SalmonTE a Bioconda package (https://github.com/bioconda/bioconda-recipes) would be great.

Thanks for all your work!

hyunhwan-jeong commented 6 years ago

Dear @bgruening,

Thanks for interest this tool! This must be a great idea, but I can't start to work on this now because I am out of town. I will take a look the manual which you have attached to this issue soon.

Best Regards,

Hyun-Hwan Jeong

bgruening commented 6 years ago

Cool, thanks a lot: https://bioconda.github.io/contribute-a-recipe.html

bgruening commented 6 years ago

Any news @hyunhwaj :)

egeogretmen commented 6 years ago

I can work on making the Bioconda package. As a starter a release on Github would be much appreciated @hyunhwaj . This allows to have a stable url for downloading the repository as a zip.

Thanks!

hyunhwan-jeong commented 6 years ago

@bgruening I merely had a chance for this issue, but as @egeogretmen commented, we can work on this soon. @egeogretmen this will be helpful! I will prepare a release soon.

Xiaofei-git commented 3 years ago

How to download SalmonTE from bioconda?

hyunhwan-jeong commented 3 years ago

@Xiaofei-git unfortunately it hasn't been implemented on bioconda yet. There are a couple of technical issues that need to be resolved, and I was busy for other projects after I have moved to another institute. It is still on my TODO list. Please keep watching it.

Thank you,

Hyun-Hwan Jeong