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hyunhwan-jeong / SalmonTE

SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances
GNU General Public License v3.0
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Arabidopsis Reference #48

Closed EsperanzaDai closed 1 year ago

EsperanzaDai commented 3 years ago

Here is the Arabidopsis reference built.

hyunhwan-jeong commented 3 years ago

@EsperanzaDai thanks for the pull request. Can you share the reference file and clades_extended.csv which you used to generate the index? I also wonder you can provide any sequence file.

Thank you,

Hyun-Hwan Jeong

EsperanzaDai commented 3 years ago

The clades information is included in the clades.csv file shared in the folder. And I will share the sequence file.