hyunhwan-jeong / SalmonTE

SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances
GNU General Public License v3.0
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error executing - snakemake uses strict mode #77

Open Kiliankleemann opened 1 year ago

Kiliankleemann commented 1 year ago

/Users/kiliankleemann/SalmonTE/salmon/darwin/bin/salmon quant -i /Users/kiliankleemann/SalmonTE/reference/mm -l A -r /var/folders/p1/w5vpt8z97n3f8xvc8kzc87nc0000gn/T/tmpvc3znywe/DE12NGSUKBR137309_1.fastq.gz -o /Volumes/OhneTitel/Anne_BMDM_try_August_2023/SalmonTE_output/DE12NGSUKBR137309_1 -p 4 2>/dev/null (one of the commands exited with non-zero exit code; note that snakemake uses bash strict mode!)