Currently, the output format of an individual amplicon's header is:
><LA> | name = R<IOA> | fragment = <OF> | position = <LPOF>
<LA>: length of this amplicon
R<IOA>: amplicon name consisting of R and an amplicon index counter that starts at 1 (i.e. the last one shows the total number of amplicons in the file)
<OF>: index (<IOA>) of the fragment that this amplicon was created from, 0 is the input fasta sequence
<LPOF>: last position of this amplicon on the fragment that it was created from
Currently, the output format of an individual amplicon's header is:
<LA>: length of this ampliconR<IOA>: amplicon name consisting ofRand an amplicon index counter that starts at 1 (i.e. the last one shows the total number of amplicons in the file)<OF>: index (<IOA>) of the fragment that this amplicon was created from,0is the input fasta sequence<LPOF>: last position of this amplicon on the fragment that it was created fromAs multiple amplicons may have the same length (
<LA>), we should instead make this a unique value, i.e. switch it withR<IOA>to yield: