iDEP-SDSU / idep

Integrated Differential Expression and Pathway analysis
http://ge-lab.org/idep
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"Diff_Chr_Regions_.csv" and "Genes_in_Diff_Chr_Regions_.csv" are not consistent to genome plot #219

Open EikoSAIJOU334 opened 1 year ago

EikoSAIJOU334 commented 1 year ago

Hi, thank you for developing such a useful tool. When I used the "genome" tab, I obtained some enriched regions on chromosomes 6 and 13. The PREDA metrics also indicate the same enrichment on chromosomes 6 and 13. However, the downloaded CSV files only include results for chromosomes 3, 7, 8, and 13. The PREDA visualization displays that chromosome 6 is the most significant. Can you explain why the results for chromosome 6 are not included in the downloaded CSV files?