iRNA-COSI / APAeval

Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differential usage across RNA-seq samples
MIT License
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Execution workflow update: enable Singularity option for TAPAS #442

Closed faricazjj closed 1 year ago

faricazjj commented 1 year ago

Problem When running TAPAS on huge datasets, using docker often led to out of memory issues. (exit 137) However, using Singularity seemed more stable and the workflow didn't error out with out of memory issues

Solution As such, add the option to run with Singularity for TAPAS workflow