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iSEE / iSEEu

The iSEE Universe
https://bioconductor.org/packages/devel/bioc/html/iSEEu.html
MIT License
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Coloring Volcano by selected gene while keeping up and down colors #109

Closed daymecita closed 2 weeks ago

daymecita commented 2 years ago

Hi! I see the Volcano plot is colored by up and down genes when Color by is "None". I would like to color by Feature Name sometimes but keeping the up and down genes colored. Could you please point me out on how to implemment this?

Thanks!

LTLA commented 2 years ago

IIRC this probably won't be easy. The up/down coloring only affects the default None color-by status; any user request to use non-None color will override the default coloring. This is, on the whole, desirable for most users as it is hard to distinguish between the pink-ish up color and the default red color used for highlighting the selected feature.

kevinrue commented 2 weeks ago

Closing this as no immediate plan to implement