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iVis-at-Bilkent / sbgnviz.js

A web based visualization tool for process description maps in SBGN
http://www.cs.bilkent.edu.tr/~ivis/SBGNViz_sample_app/
GNU Lesser General Public License v3.0
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Experiment unit of info layout #182

Closed royludo closed 7 years ago

metincansiper commented 7 years ago

This changes decreases the load performance significantly. There is a large graph which can be loaded in a reasonably short time before these changes. After these changes it cannot be loaded even though I am waiting for a long time.

metincansiper commented 7 years ago

The graph that I mentioned is attached large_sbgnml.txt

royludo commented 7 years ago

@metincansiper that should be fixed by iVis-at-Bilkent/sbgnviz.js@43efa06e1f9803c44335270171ec9bc9374405db

kinimesi commented 7 years ago

@royludo Unit of information is not rendered on simple chemicals. Reproduce: in newt add "Unit of Information" to a simple chemical.

Edit: I think it is due to the size. After resizing, it works properly.

royludo commented 7 years ago

@kinimesi yes, it's because the simple chemical is not large enough by default. It's expected behavior right now. To change that we would need to change the default size of either the chemical or the infobox.

ugurdogrusoz commented 7 years ago

@royludo I started testing the new info box stuff; I'll report them as issues @kinimesi please you do it as new issues as well (this one will be part of an issue I'll create in a moment)