Name of project/tool - Githubissues

iVis-at-Bilkent / sybvals

SyBValS: Systems Biology Validation Service

MIT License

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Name of project/tool #1

Closed ugurdogrusoz closed 2 months ago

ugurdogrusoz commented 6 months ago

[x] 1. Name the service as SyBValS (Systems Biology Validation Service) everywhere in the sample application, including the About dialog
[x] 2. Name this repository as "sybvals"
[x] 3. Write a README introducing the service (use a format similar to this)

ugurdogrusoz commented 3 months ago

@hasanbalci Please check the Usage (I reviewed the rest).

hasanbalci commented 3 months ago

I went over the README, revised the options and examples in the Usage section. I also added small explanations to the first part that the sbgn file with corrected errors is produced. The only issue is that the small test file (with 3 nodes and 2 edges) that I used in README works for validation query, but gives error when we try to resolve errors. I added this to issue #8.

hasanbalci commented 3 months ago

It would be good if we change the screenshots in README since now we are applying incremental layout between validation and error fix.

ugurdogrusoz commented 2 months ago

Update ss's please check

hasanbalci commented 2 months ago

Looks good, thanks!