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iarpa-felix
/
synbio-schema
A schema for synthetic biology, inspired by IARPA FELIX
https://semantic-synbio.github.io/synbio-schema/
MIT License
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Should emails be included in the Person table?
#28
turbomam
opened
2 years ago
0
Add Celniker lab staff to this repo
#27
turbomam
opened
2 years ago
0
Most python needs to be refactored and documented
#26
turbomam
opened
2 years ago
0
clarify that users outside of the Celniker lab would need to write their own connecter
#25
turbomam
opened
2 years ago
1
2022-10-05 status, esp. deviations from felix database
#24
turbomam
opened
2 years ago
0
some uniprot/swissprot accessions are ending up in `other_accessions`
#23
turbomam
opened
2 years ago
0
consolidate user settings
#22
turbomam
opened
2 years ago
0
sequence -> GO terms etc should be better normalized
#21
turbomam
opened
2 years ago
0
new scripts need CLIs
#20
turbomam
opened
2 years ago
0
assign annotation level to fpbase proteins
#19
turbomam
opened
2 years ago
0
for which modification or part types are sequences being BLASTed
#18
turbomam
opened
2 years ago
2
can't seem to install schema-automator
#17
turbomam
opened
2 years ago
0
linkml and linkml-runtime may have diverged from cookicutter
#16
turbomam
opened
2 years ago
0
added site gen-project gendoc to phonies
#15
turbomam
opened
2 years ago
0
give sql/without_attachement.sql a more meaningful name
#14
turbomam
opened
2 years ago
0
get fpbase protein details
#13
turbomam
opened
2 years ago
0
support for deletions etc.
#12
turbomam
opened
2 years ago
0
support for multi-insert modifications
#11
turbomam
opened
2 years ago
0
BLAST-based characterization of non-coding sequences
#10
turbomam
opened
2 years ago
0
consolidate target, resources directories?
#9
turbomam
opened
2 years ago
0
documentation: NCBI BLAST binaries must be on path
#8
turbomam
opened
2 years ago
0
sqlite3.OperationalError: table sqlite_master may not be modified
#7
turbomam
opened
2 years ago
0
use python csv instead of pandas
#6
turbomam
opened
2 years ago
0
how to do cruft update
#5
turbomam
opened
2 years ago
0
illustrate DH build workflow
#4
turbomam
opened
2 years ago
0
build actions failing
#3
turbomam
opened
2 years ago
0
Cannot find reference 'datamodel' in '__init__.py'
#2
turbomam
opened
2 years ago
1
add GH actions
#1
turbomam
closed
2 years ago
0