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iblacksand
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WebGestaltR
R package for WebGestalt
https://iblacksand.github.io/WebGestaltR/
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Add CookieConsent, fix multi-coloring, and add Rust NTA Method
#22
Closed
iblacksand
closed
6 months ago
iblacksand
commented
6 months ago
windows target
log10p for meta analysis and fix overlap id for ORA
remove printing
idmapping fixes
fix id mapping
add score check
fix errors with bars
add size start
improve id mapping for metabolites
possible fix
diagnositics
add null checks
more diagnostics
fix metabolite mapping
add try to error prone section
bigger block
edit links if possible
potential fix
diagnostics
fdr fix if equal to 1
revert broken links
fix bounds
fix multi-list with no descriptions
fix multiora
fix ora gene set des being overridden
add place for no genesetdes
address another black hole
fix error with genesetdes
fix example
fix gene set prob
test meta-p
fix variable name
stop
fix logp calculation
fix nes vals
fix meta-p if only one p_val
fix ora meta logp
better ora signs
better log p for single lists
make gene set null
better logp
add printing
only add colnames if success possible
fix negative meta-p
fix hmdb ora coloring
use two to one
remove empty argument
custom two2one'
abs p vals
diagnostics
remove bad filter
remove print
add flips
revert
add better flip
fix flips
fix flips
use paste0
use new bool_flips
use new variable
use abs for single meta analysis
more small ora fixes
remove bad genetable init
diagnostic
possible fix
fix diagn
more fixes
more diag
alternative meta
alternative meta
fix starting i
diags
more updates
na check
fix index
add better p value check
fix flips
revert link if needed
add cookie consent
test nta
fix
more hardcode
more hardcode
fix wikipathways
attemtpts to fix example bug
attemtpts to fix example bug
remove hardcode
add better cookie messgaew
fix kegg mapping
undo push
only distinct
still show not found if no scores
potential fix
remove id overlay
use leading edge if possible
fix links not appearing and update readme
update to use rust for nta
fix problem with unequal rows
update nta library to 0.3.0
fix loading rampdb metabolomics gmt