iblacksand / WebGestaltR

R package for WebGestalt
https://iblacksand.github.io/WebGestaltR/
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Improve or clarify the reportNum parameter #7

Open iblacksand opened 11 months ago

iblacksand commented 11 months ago

This is a mirror of the bug report: https://github.com/bzhanglab/WebGestaltR/issues/34


Original Text:

Currently because cluster representatives of redundancy reduction methods are always added to the top results shown in the webpage, the actual number of gene sets could exceed the reportNum threshold. Or the information will not be available when AP or WSC is chosen. Either we can store a separate list for them or figure out a better way since the redundancy reduction need some changes in the new version.

Another related problem is when representatives are rescued, they are just appended to the end without sorting again. This could be fixed quickly.