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icbi-lab / infercnvpy

Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
https://infercnvpy.readthedocs.io/en/latest/
BSD 3-Clause "New" or "Revised" License
122 stars 27 forks source link

template update icbi lab infercnvpy v0.2.22 #111

Closed grst closed 9 months ago

grst commented 9 months ago
codecov-commenter commented 9 months ago

Codecov Report

Merging #111 (a7466c0) into main (4ff5f8f) will decrease coverage by 9.89%. The diff coverage is 100.00%.

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Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #111 +/- ## ========================================== - Coverage 65.14% 55.26% -9.89% ========================================== Files 13 13 Lines 416 418 +2 ========================================== - Hits 271 231 -40 - Misses 145 187 +42 ``` | [Files](https://app.codecov.io/gh/icbi-lab/infercnvpy/pull/111?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=icbi-lab) | Coverage Δ | | |---|---|---| | [src/infercnvpy/pl/\_chromosome\_heatmap.py](https://app.codecov.io/gh/icbi-lab/infercnvpy/pull/111?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=icbi-lab#diff-c3JjL2luZmVyY252cHkvcGwvX2Nocm9tb3NvbWVfaGVhdG1hcC5weQ==) | `96.00% <100.00%> (ø)` | | | [src/infercnvpy/tl/\_infercnv.py](https://app.codecov.io/gh/icbi-lab/infercnvpy/pull/111?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=icbi-lab#diff-c3JjL2luZmVyY252cHkvdGwvX2luZmVyY252LnB5) | `51.51% <100.00%> (+0.49%)` | :arrow_up: | | [src/infercnvpy/tl/\_scores.py](https://app.codecov.io/gh/icbi-lab/infercnvpy/pull/111?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=icbi-lab#diff-c3JjL2luZmVyY252cHkvdGwvX3Njb3Jlcy5weQ==) | `77.58% <100.00%> (+0.39%)` | :arrow_up: | ... and [1 file with indirect coverage changes](https://app.codecov.io/gh/icbi-lab/infercnvpy/pull/111/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=icbi-lab)