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icbi-lab / nextNEOpi

nextNEOpi: a comprehensive pipeline for computational neoantigen prediction
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Not able to pull the images from apps-01.i-med.ac.at #28

Closed mantczakaus closed 1 year ago

mantczakaus commented 1 year ago

Hi,

I'm getting the following error when nextNEOpi tries to pull the image from apps-01.i-med.ac.at (example is from Neofuse but it doesn't happen only for Neofuse). Images from depot.galaxy were downloaded fine.

Error executing process > 'Neofuse (patient1)'

Caused by:
  Failed to pull singularity image
  command: singularity pull  --name apps-01.i-med.ac.at-images-singularity-NeoFuse_dev_0d1d4169.sif.pulling.1688026251334 https://apps-01.i-med.ac.at/images/singularity/NeoFuse_dev_0d1d4169.sif > /dev/null
  status : 255
  message:
    FATAL:   Error making http request: Head "https://apps-01.i-med.ac.at/images/singularity/NeoFuse_dev_0d1d4169.sif": x509: certificate signed by unknown authority
mantczakaus commented 1 year ago

I tried to download it with wget, this is an error:

wget https://apps-01.i-med.ac.at/images/singularity/NeoFuse_dev_0d1d4169.sif
--2023-06-30 08:31:26--  https://apps-01.i-med.ac.at/images/singularity/NeoFuse_dev_0d1d4169.sif
Resolving apps-01.i-med.ac.at (apps-01.i-med.ac.at)... 193.171.78.134
Connecting to apps-01.i-med.ac.at (apps-01.i-med.ac.at)|193.171.78.134|:443... connected.
ERROR: The certificate of ‘apps-01.i-med.ac.at’ is not trusted.
ERROR: The certificate of ‘apps-01.i-med.ac.at’ hasn't got a known issuer.
riederd commented 1 year ago

Hi, thanks for reporting. We just recently updated our SSL certificate and forgot to add the new CA into the certificate chain. Should work now, please feel free to reopen if not.