icbi-lab / nextNEOpi

nextNEOpi: a comprehensive pipeline for computational neoantigen prediction
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New version of nextNEOpi #84

Open mantczakaus opened 1 month ago

mantczakaus commented 1 month ago

Hi I was wondering when we could expect nextNEOpi2 and what differences we can expect between version 1 and 2. As you are aware, I've been experiencing many performance issues while running nextNEOpi on WGS data and I am curious whether this will be addressed in the new version. We are happy to test the new version on our WGS data if it helps. Best wishes, Magda