icbi-lab / nf-deseq2

A RNA-seq differential expression analysis pipeline downstream of nf-core/rnaseq.
BSD 2-Clause "Simplified" License
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added empty BiotypeQC.nf script to modules #19

Closed ausserh closed 2 years ago

ausserh commented 2 years ago

I will add my module to this yet still empty script

grst commented 2 years ago

@ausserh , I implemented a demo process that consumes the samplesheet and gene expression matrix. You can add the BioQC process to the main workflow in the same way and it should get tested automatically using these test data.

https://github.com/icbi-lab/nf-deseq2/blob/19ccb77a88c184aba2b322b39cad0474ab7465b3/main.nf#L7-L15