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icbi-lab / nf-deseq2

A RNA-seq differential expression analysis pipeline downstream of nf-core/rnaseq.
BSD 2-Clause "Simplified" License
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Samplesheet preprocess #27

Open ZuzanaLoncova opened 2 years ago

ZuzanaLoncova commented 2 years ago

preprocessing of the samplesheets

grst commented 2 years ago

The R script looks good, the next step would be to make it work with nextflow. I added some tips in this comment: https://github.com/icbi-lab/nf-deseq2/pull/28#pullrequestreview-861403411