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icbi-lab / nf-deseq2

A RNA-seq differential expression analysis pipeline downstream of nf-core/rnaseq.
BSD 2-Clause "Simplified" License
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put publish dir logic into main config file #33

Open riederd opened 2 years ago

riederd commented 2 years ago

https://github.com/icbi-lab/nf-deseq2/blob/9910dc2edb6e09b145fac12999475ca3edab6372/modules/VolcanoPlot.nf#L9

It would be nice to have the publish dir settings in nextflow.config, e.g.:

withName: VolcanoPlot { publishDir = [path: params.resDir + '/VolcanoPlots', mode: params.publish_dir_mode] }