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icgc-argo-workflows
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nextflow-data-processing-utility-tools
Nextflow implementation of https://github.com/icgc-argo/data-processing-utility-tools
Apache License 2.0
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Song score upload@2.9.3
#53
edsu7
closed
1 year ago
1
Add `--force` to song/score upload/download modules
#52
lindaxiang
closed
1 year ago
1
Song score upload@2.9.2
#51
edsu7
closed
1 year ago
0
Song score download@2.9.0
#50
edsu7
closed
1 year ago
0
add support for docker
#49
edsu7
closed
1 year ago
1
Song score upload@2.9.1
#48
edsu7
closed
1 year ago
0
Song score upload@2.9.0
#47
lindaxiang
closed
1 year ago
0
fix the song-score-upload version to 2.8.0
#46
lindaxiang
closed
1 year ago
0
fix the song-score-upload version to 2.8.0
#45
lindaxiang
closed
1 year ago
0
Song score download@2.8.0
#44
lindaxiang
closed
1 year ago
0
update song/score containers to ghcr
#43
lindaxiang
closed
1 year ago
0
update to new repo for the song/score packages
#42
lindaxiang
closed
1 year ago
2
add feature to support to take user defined `container` and `container_version`
#41
lindaxiang
closed
1 year ago
2
Song score download@2.7.0
#40
lindaxiang
closed
1 year ago
0
Song score upload@2.8.0
#39
lindaxiang
closed
1 year ago
0
Song score upload@2.7.0
#38
junjun-zhang
closed
3 years ago
0
new feature in song/score upload subworkflow to skip submit step
#37
junjun-zhang
closed
9 months ago
1
Improve the song/score upload/download retry mechanism
#36
lindaxiang
opened
3 years ago
2
Song score download@2.6.2
#35
junjun-zhang
closed
3 years ago
0
Song score upload@2.6.1
#34
junjun-zhang
closed
3 years ago
0
Song score download@2.6.1
#33
junjun-zhang
closed
3 years ago
0
Song score upload@2.6.0
#32
junjun-zhang
closed
3 years ago
0
Song score download@2.6.0
#31
junjun-zhang
closed
3 years ago
0
added files for wfpm
#30
junjun-zhang
closed
3 years ago
0
update to support retry on failure
#29
junjun-zhang
closed
3 years ago
1
Fix/main test analysis version
#28
lepsalex
closed
3 years ago
0
update main.nf to write workflow into SONG
#27
lepsalex
closed
3 years ago
0
runName for secret name
#26
andricDu
closed
4 years ago
0
Fix/pod secret params
#25
lepsalex
closed
4 years ago
0
k8s secret name will come from params.
#24
andricDu
closed
4 years ago
0
improvement: make the SONG/SCORE processes cacheable
#23
junjun-zhang
closed
3 years ago
2
update to allow api_token to be used (ex. when not in k8s)
#22
lepsalex
closed
4 years ago
0
dsl2-enable
#21
jaserud
closed
4 years ago
0
Fixes access token export for k8s secret
#20
andricDu
closed
4 years ago
0
New k8s secrets
#19
andricDu
closed
4 years ago
0
minor improvements
#18
junjun-zhang
closed
4 years ago
0
Song submit fix
#17
lepsalex
closed
4 years ago
0
score default version set to 5.0.0
#16
lepsalex
closed
4 years ago
0
update song client image to 4.2.0
#15
junjun-zhang
closed
4 years ago
0
Remove extract analysis
#14
lepsalex
closed
4 years ago
0
Upgrade to latest SONG/SCORE containers
#13
lepsalex
closed
4 years ago
0
Upgrade to NF20.x + Use secure env
#12
lepsalex
closed
4 years ago
0
add analysis_id as prefix for analysis json file
#11
lindaxiang
closed
4 years ago
0
Feature Request - song_get_analysis output dynamic instead of static name
#10
lindaxiang
closed
4 years ago
1
turn one tuple output to two explicit outputs
#9
junjun-zhang
closed
4 years ago
0
Fix/score performance
#8
andricDu
closed
4 years ago
0
Song score container updates
#7
lepsalex
closed
4 years ago
0
Schema updates
#6
lepsalex
closed
4 years ago
0
Test SCORE Fuse Mounting
#5
lepsalex
opened
4 years ago
0
A2 payload generator
#4
lepsalex
closed
4 years ago
0
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