Added 6 new terms (Supportive, Diagnostic, Preventative, Guidance, Screening, Forensic) to the controlled terminology for the treatment_intent field in the Treatment table (https://github.com/icgc-argo/argo-dictionary/issues/364).
Added 8 new terms (Conditioning, Induction, Locally advanced, Maintenance, Mobilization, Preventative, Radiosensitization, Salvage) to the controlled terminology for the treatment_setting field in the Treatment table. The term Not applicable was removed but if required, programs will need to apply for a clinical exception. (https://github.com/icgc-argo/argo-dictionary/issues/363)
Added a new required response_to_treatment_criteria_method field in the Treatment table. This field consists of a list of response criteria methods, in addition to RECIST (https://github.com/icgc-argo/argo-dictionary/issues/378)
Added new terms for response criteria in the response_to_treatment field in the Treatment table. The value submitted in this field will be validated against the response_to_treatment_criteria_method field to ensure the correct response criteria term is submitted (https://github.com/icgc-argo/argo-dictionary/issues/378)
Added new prescribed_cumulative_drug_dose field and renamed existing cumulative_drug_dose field to actual_cumulative_drug_dose in the Chemotherapy and Hormone Therapy tables. Added new fields for prescribed_cumulative_drug_dose and actual_cumulative_drug_dose in the Immunotherapy table. Either field can be submitted. Replaced dosage with dose for consistency purposes. (https://github.com/icgc-argo/argo-dictionary/issues/393 and https://github.com/icgc-argo/argo-dictionary/issues/379)
Ready to merge all dictionary version 1.16 updates to master branch. All changes tested in DEV, QA and Staging. This includes:
Unknown primary siteto the controlled terminology for theprimary_sitefield in the Donor table (https://github.com/icgc-argo/argo-dictionary/issues/365)Supportive,Diagnostic,Preventative,Guidance,Screening,Forensic) to the controlled terminology for thetreatment_intentfield in the Treatment table (https://github.com/icgc-argo/argo-dictionary/issues/364).Conditioning,Induction,Locally advanced,Maintenance,Mobilization,Preventative,Radiosensitization,Salvage) to the controlled terminology for thetreatment_settingfield in the Treatment table. The termNot applicablewas removed but if required, programs will need to apply for a clinical exception. (https://github.com/icgc-argo/argo-dictionary/issues/363)Unknownfromis_primary_treatmentfield. If required, programs will need to apply for a clinical exception. (https://github.com/icgc-argo/argo-dictionary/issues/356)response_to_treatment_criteria_methodfield in the Treatment table. This field consists of a list of response criteria methods, in addition to RECIST (https://github.com/icgc-argo/argo-dictionary/issues/378)response_to_treatmentfield in the Treatment table. The value submitted in this field will be validated against theresponse_to_treatment_criteria_methodfield to ensure the correct response criteria term is submitted (https://github.com/icgc-argo/argo-dictionary/issues/378)lymph_nodes_examined_methodfield in the Primary Diagnosis table (https://github.com/icgc-argo/argo-dictionary/issues/377)pathological_m_categoryfield in the Specimen table to be submitted as "Not applicable" if AJCC 7th or 8th editions used (https://github.com/icgc-argo/argo-dictionary/issues/366)recurrence_tumour_staging_systemfield in the Follow Up table so it is no longer a core field (https://github.com/icgc-argo/argo-dictionary/issues/376)prescribed_cumulative_drug_dosefield and renamed existingcumulative_drug_dosefield toactual_cumulative_drug_dosein the Chemotherapy and Hormone Therapy tables. Added new fields forprescribed_cumulative_drug_doseandactual_cumulative_drug_dosein the Immunotherapy table. Either field can be submitted. Replaceddosagewithdosefor consistency purposes. (https://github.com/icgc-argo/argo-dictionary/issues/393 and https://github.com/icgc-argo/argo-dictionary/issues/379)Revised International staging system (RISS)in the tumour_staging_system fields toR-ISSinstead ofRISS(https://github.com/icgc-argo/argo-dictionary/issues/372)