for WGS data, md5sum check takes a long time to complete. As all other checks are very fast, md5sum check may take over 90% of the execution time. In order to allow much quicker iteration of metadata checking and fixing, the user can temporarily skip md5sum check until all other checks are passed.
As c680 check includes both fileSize and fileMd5sum checks, it would be good to split them into two separate checks: c681_fileSize_match and c683_fileMd5sum_match.
junjun-zhang
commented
3 years ago
for WGS data, md5sum check takes a long time to complete. As all other checks are very fast, md5sum check may take over 90% of the execution time. In order to allow much quicker iteration of metadata checking and fixing, the user can temporarily skip md5sum check until all other checks are passed.
As c680 check includes both fileSize and fileMd5sum checks, it would be good to split them into two separate checks:
c681_fileSize_matchandc683_fileMd5sum_match.