Make public XML to VCF conversion documentation - Githubissues

icgc-argo / workflow-roadmap

Roadmap and management for genomic data processing

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Make public XML to VCF conversion documentation #458

Open edsu7 opened 2 months ago

edsu7 commented 2 months ago

Work in progress - current saved to : https://github.com/icgc-argo-workflows/xml_variant_ingestion/blob/dev/document.md

Will have to find a permanent home: https://github.com/icgc-argo/argo-docs/tree/main/docs/analysis-workflows

On doc site: https://docs.icgc-argo.org/docs/analysis-workflows/dna-alignment

[ ] rename workflow name property for viewing on platform as to be more informative (rather than XML to VCF)
[ ] start branch in doc
[ ] formalize diagram
[ ] update generating workflows https://docs.icgc-argo.org/docs/data/variant-calls for relevant data types