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idekerlab / atgo

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Search result issue (assigned genes) #1

Closed keiono closed 8 years ago

keiono commented 8 years ago

Several of the nodes are having issues with the genes assigned to them in the top right display, the gene tab and the interactions tab. For example, when I click on the term "prApe1 aggregate processing", it shows only Atg11, Atg19, and Atg27 in both the top right display, the gene tab and the interactions tab even though this term also includes Atg26 (the term size is correctly noted as 4). I also see a similar issue for the term "membrane fusion" which is AtgO:121 and is missing Vtc1 from the genes and interactions tab and the top right display (but correctly shows term size 4 and shows Vtc1 as an assigned gene in the search results if I search for "Vtc1"). If I click AtgO:191, it shows no genes in the genes tab or the top right display - the search results and the term size correctly show 2 genes (CSG2, VMA3). Not sure how pervasive this problem is but it appears it's happening a fair amount.

keiono commented 8 years ago

Actually, this is a two separate problem:

  1. Server returns no interactions for term 191 (and several others)
  2. Search result window displays not all assigned genes

I'll create new issue for 1.

keiono commented 8 years ago

The issue 2 fixed. Now all genes are included in both Genes tab and search result.