idem-lab epiwave.pipelines issues

idem-lab / epiwave.pipelines

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allow fit_model to take in inits

#51 AugustHao opened 1 month ago
1
simplify so there is one post-fitting step that does greta::calculate

#50 smwindecker opened 8 months ago
0
modify observation model function to check infection days

#49 smwindecker opened 8 months ago
0
Revisit and edit two plot functions

#48 smwindecker opened 8 months ago
1
ready for dev release

#47 smwindecker closed 8 months ago
0
improved correction for test type proportion, no longer causes level shift in infection time-series

#46 AugustHao closed 9 months ago
0
Target dates changes and minor plotting fixes

#45 SeniorKate closed 9 months ago
0
iid noise in observation process

#44 AugustHao opened 9 months ago
1
quick and dirty implementation for nowcast window

#43 AugustHao closed 9 months ago
0
incorporate DOW in separate function

#42 smwindecker closed 9 months ago
0
corrected completion prob calculation

#41 AugustHao closed 9 months ago
0
curve-wise credible interval for visualising timeseries posteriors

#40 AugustHao closed 7 months ago
1
Generalise get_ascertainment_input function

#39 SeniorKate opened 9 months ago
2
Incorportating uncertainty into time-varying CAR

#38 SeniorKate opened 9 months ago
3
New case ascertainment with better uncertainty

#37 SeniorKate closed 7 months ago
1
End RAT dates for WA and NSW

#36 SeniorKate closed 9 months ago
0
computationally efficient time-varying delay estimation

#35 AugustHao closed 7 months ago
0
improve test type correction

#34 AugustHao closed 9 months ago
2
make CAR and local cases input processing independent from old code base

#33 AugustHao closed 7 months ago
4
make posterior and prior checkign plots

#32 AugustHao opened 10 months ago
1
time-varying DOW

#31 AugustHao opened 10 months ago
2
make nowcast window

#30 AugustHao closed 7 months ago
5
sparse GP

#29 AugustHao opened 10 months ago
1
make case forecast function

#28 AugustHao opened 10 months ago
0
impelmenting time-constant DOW effect

#27 AugustHao closed 10 months ago
0
issue template

#26 smwindecker opened 10 months ago
1
Need better name

#25 geryan opened 10 months ago
0
susceptible depletion

#24 smwindecker closed 5 months ago
0
implemented test type proportion correction and improved argument nam…

#23 AugustHao closed 10 months ago
0
taking out unnecessary outputs from the notification data function

#22 AugustHao closed 10 months ago
1
merge august changes and add plotting fixes

#21 smwindecker closed 10 months ago
0
plotting end date added

#20 AugustHao closed 10 months ago
0
add end of RAT reporting related changes and some smaller tweaks

#19 AugustHao closed 10 months ago
0
find a better incubation period dist

#18 AugustHao closed 8 months ago
5
simplify dates implementation

#17 smwindecker closed 10 months ago
0
WIP date fixes

#16 AugustHao closed 10 months ago
0
duplicate object names in combined_model_objects

#15 AugustHao closed 10 months ago
1
fixes to GI computation and correction to pmf prob calculation in all delays

#14 AugustHao closed 10 months ago
0
static delays

#13 smwindecker closed 10 months ago
0
Constant delay distribution

#12 SeniorKate closed 10 months ago
0
WIP posterior plot

#11 AugustHao closed 10 months ago
0
CAR test specifics

#10 SeniorKate closed 10 months ago
0
add survey data related CAR functionality

#9 smwindecker closed 10 months ago
0
mismatch length between delay lists and obs data matrix

#8 AugustHao closed 10 months ago
2
make data-dependent observation and forecast indices

#7 AugustHao closed 10 months ago
1
infection completion prob mat

#6 smwindecker closed 10 months ago
0
add updated targets workflow

#5 smwindecker closed 10 months ago
0
flexibility in estimate_delays

#4 smwindecker opened 10 months ago
3
rounding issues w/ mass functions

#3 smwindecker closed 10 months ago
2
filter out recent days?

#2 smwindecker closed 7 months ago
1