igematberkeley / NLPChemExtractor

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BERT Summarization: Finding Similarities between Brenda Reactions and Summaries #20

Open jierui-cell opened 3 years ago

jierui-cell commented 3 years ago

After producing the summaries of each paper, we need to compare the summaries with the corresponding Brenda reaction to see the Summarization approach's accuracy. The difficulty now is how to determine whether the Brenda reaction is contained in the summarized sentences. Sometimes stuffs like NADPH are usually not mentioned in the summarized sentences, and a lot of the time the chemical names are not exactly the same. We are trying to find a way to calculate the similarities.