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igvteam / igv-notebook

Module for embedding igv.js in an IPython notebook
MIT License
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.version() and .igv_version() methods raise a FileNotFoundError #14

Closed safay closed 1 year ago

safay commented 1 year ago

Package version: igv-notebook==0.4.2, installed with pip Python version: 3.9.15 OS: Ubuntu 18.04.6 LTS

Executing igv_notebook.version() as per the documentation raises an error:

---------------------------------------------------------------------------
FileNotFoundError                         Traceback (most recent call last)
Cell In[7], line 1
----> 1 igv_notebook.version()

File /opt/tljh/user/lib/python3.9/site-packages/igv_notebook/version.py:3, in version()
      2 def version():
----> 3     with open('VERSION') as version_file:
      4        return version_file.read().strip()

FileNotFoundError: [Errno 2] No such file or directory: 'VERSION'

A similar error is raised for the .igv_version() method.

Perhaps this is related to the fact that this is not a dev (-e) install, and it's just the README that needs updating?

jrobinso commented 1 year ago

That looks like a packaging bug. Thanks for the report, I'll look into it.

jrobinso commented 1 year ago

This is now fixed in release 0.4.3