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igvteam / igv-reports

Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.
MIT License
350 stars 52 forks source link

create_report: error: unrecognized arguments: --zero-based false #92

Closed yunkaig closed 1 year ago

yunkaig commented 1 year ago

This is probably a minor issue, but the argument for "zero based" is called "--zero-based" (with a dash in between like other arguments) in the Github README doc. But the create_report script asks for "--zero_based" with an underscore in between words, according to the output of create_report -h.

Not really a big issue but just so you are aware of this. Thanks!

jrobinso commented 1 year ago

Thanks for the report. Stepping back a bit I'm not sure what motivated that argument. The file formats excepted define this in there specs. I suppose the only use-case for this if you use a generic (custom) tab-delimited file for your input.

I will update the README