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ilri
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hpc-environment-modules
Environment modules for the ILRI, Nairobi HPC cluster
https://hpc.ilri.cgiar.org/list-of-software
GNU General Public License v3.0
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Update trinity to v2.1.1
#42
oguya
closed
8 years ago
0
Install plink v1.9
#41
oguya
closed
8 years ago
0
Install ClonalFrameML
#40
oguya
closed
8 years ago
0
Install eXpress
#39
oguya
closed
9 years ago
0
Install Trimmomatic
#38
oguya
closed
9 years ago
0
Install ClonalFrame
#37
oguya
closed
9 years ago
0
Install BRIG
#36
oguya
closed
9 years ago
0
Install RDP Classifier
#35
oguya
closed
9 years ago
0
Install NetMHCpan
#34
oguya
closed
9 years ago
0
Update SPADES
#33
alanorth
closed
9 years ago
0
Install vcflib
#32
oguya
closed
9 years ago
0
Install BUSCO
#31
alanorth
closed
9 years ago
0
Install SnpEff
#30
alanorth
closed
9 years ago
1
Update R to R/3.2.x
#29
oguya
closed
9 years ago
0
Update circos
#28
oguya
closed
9 years ago
3
Update fastqc
#27
oguya
closed
9 years ago
0
Update jellyfish
#26
oguya
closed
9 years ago
0
Update bwa
#25
oguya
closed
9 years ago
1
Update quast
#24
oguya
closed
9 years ago
0
Update RAxML
#23
oguya
closed
9 years ago
0
Update RSEM/1.2.9
#22
oguya
closed
9 years ago
0
Update usearch
#21
oguya
closed
9 years ago
0
Update bowtie
#20
oguya
closed
9 years ago
0
Update tophat2
#19
oguya
closed
9 years ago
0
Install FragGeneScan
#18
oguya
closed
9 years ago
0
Update interproscan and add a module file
#17
oguya
closed
9 years ago
0
scythe
#16
alanorth
closed
9 years ago
1
cutadapt v1.8.1
#15
alanorth
closed
9 years ago
1
Install Trinotate
#14
oguya
closed
9 years ago
1
Update to Picard tools 1.133
#13
alanorth
closed
9 years ago
0
Update Abyss to 1.9.0
#12
alanorth
closed
9 years ago
0
Install scythe
#11
oguya
closed
9 years ago
1
Install htslib 1.2.1
#10
oguya
closed
9 years ago
4
Install Jellyfish 2.2.0
#9
alanorth
closed
9 years ago
2
Install Stringtie v1.0.2
#8
alanorth
closed
9 years ago
1
Install HPG-Variant
#7
alanorth
closed
9 years ago
4
Upgrade vcftools to 0.1.12b
#6
oguya
closed
9 years ago
1
Upgrade Bowtie2 to 2.2.5
#5
alanorth
closed
9 years ago
4
Upgrade Trinity to v2.0.6
#4
alanorth
closed
9 years ago
1
Install RSEM
#3
oguya
closed
9 years ago
1
Update Trinity to r20140717
#2
alanorth
closed
9 years ago
3
Install SolexaQA
#1
alanorth
closed
9 years ago
2