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imasterRafa
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phyml
Automatically exported from code.google.com/p/phyml
GNU General Public License v2.0
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Patch for /trunk/README
#18
GoogleCodeExporter
opened
8 years ago
0
Topology constraint not working, even with patch
#17
GoogleCodeExporter
closed
8 years ago
1
GBS model through the XML interace
#16
GoogleCodeExporter
opened
8 years ago
0
Variable Rates Across Sites
#15
GoogleCodeExporter
opened
8 years ago
0
Non parametric bootstraping
#14
GoogleCodeExporter
opened
8 years ago
1
Optimise Rate Parameter option
#13
GoogleCodeExporter
opened
8 years ago
1
Merge PhyML+BEAGLE into trunk
#12
GoogleCodeExporter
closed
8 years ago
2
Do the site likelihoods really need to be retreived?
#11
GoogleCodeExporter
opened
8 years ago
1
Consider removing the need to maintain a "local" copy of the P-matrices
#10
GoogleCodeExporter
opened
8 years ago
1
Update all transition matrices in one go
#9
GoogleCodeExporter
opened
8 years ago
1
Floating point error check in BEAGLE needs to be circumvented
#8
GoogleCodeExporter
closed
8 years ago
4
Incorporate invariant sites estimation with edgelikelihood calculation
#7
GoogleCodeExporter
opened
8 years ago
0
IBM XLC compiler optimization -O3 causes data corruption in the tree
#6
GoogleCodeExporter
closed
8 years ago
7
Updated partials are not used
#5
GoogleCodeExporter
closed
8 years ago
2
P-Matrices have obscenely large values when using a single rate category on the attached dataset
#4
GoogleCodeExporter
closed
8 years ago
2
Ratio tests crash (i.e. aBayes/aLRT)
#3
GoogleCodeExporter
closed
8 years ago
1
Branch likelihoods differ on certain branch(es), yet the final likelihood and site likelihoods are the same
#2
GoogleCodeExporter
closed
8 years ago
1
Final likelihood differs with user input tree
#1
GoogleCodeExporter
closed
8 years ago
2