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imbs-hl / survivalsvm

Survival Support Vector Analysis
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Clinical Kernel #5

Open annette987 opened 5 years ago

annette987 commented 5 years ago

I have been using 'survivalsvm' but have just learnt from this paper https://www.elen.ucl.ac.be/Proceedings/esann/esannpdf/es2010-16.pdf about the idea of a clinical kernel for survivalsvm. I was wondering if the clinical kernel has been implemented in R and if so how would I access it. Thanks.

mnwright commented 5 years ago

It's not yet implemented in the package. Do you know of any other implementation?

annette987 commented 5 years ago

Yes, there is a Python implementation here: https://github.com/sebp/scikit-survival See scikit-survival/sksurv/kernels/clinical.py

mnwright commented 5 years ago

Thanks, that looks doable. @fouodo What do you think?

fouodo commented 5 years ago

I think we can integrate that to the package. I will add the task into my toDo list.

Regards, Cesaire

On 10. Apr 2019, at 13:00, Marvin N. Wright notifications@github.com wrote:

Thanks, that looks doable. @fouodo https://github.com/fouodo What do you think?

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annette987 commented 5 years ago

Thank you very much.

annette987 commented 5 years ago

Just wondering if you have had any time to start on this task yet.

fouodo commented 5 years ago

Hi Annette,

sorry, not yet. But I will try to do it in the next day. Thank you to remember me about that.

Best regards, Cesaire

On 24. May 2019, at 08:39, annette987 notifications@github.com wrote:

Just wondering if you have had any time to start on this task yet.

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annette987 commented 5 years ago

Hi Cesaire, I really appreciate you doing this. Have you had a chance to make any progress on it yet? Thanks, Annette