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imgag
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ngs-bits
Short-read sequencing tools
MIT License
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Amazon version of GSvarServer
#485
Open
ubuntolog
opened
10 months ago
ubuntolog
commented
10 months ago
[x] make a diagram showing the new architecture
[x] implement some data upload option (e.g. web UI, simple FTP server)
[x] add basic unit tests
[ ] integration tests
[ ] add tests for all endpoints
[x] add GitHub actions for CI
[x] improve documentation
[ ] install MegSAP to be able to run pipelines
[ ] manipulate analysis_job table to display the queue status in GSvar
[x] add API documentation
[ ] API calls for creating AWS services
[ ] UI for creation and management of AWS services
[x] Run Amazon API calls in separate threads (using Redis queue)
[ ] GSvar client app download through GSCloud
[ ] Automatic creation of an empty NGSD database with init data and a single admin user
[ ] Document the process for the customer(organization) admin