LongReads: add long-read support for SampleGender and GSvar

imgag / ngs-bits

Short-read sequencing tools

MIT License

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Closed leonschuetz closed 7 months ago

leonschuetz commented 7 months ago

[x] add function to detect single-end BAM files
- [x] count paired-end reads on BRCA1 exon
[x] implement in GSvar
[x] add parameter in SampleGender
[x] add tests
[x] implement in GSvar

leonschuetz commented 7 months ago

implemented in e9da0ca9449f1e214fe5efcedbef41bc3ed8210f