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imgag / ngs-bits

Short-read sequencing tools
MIT License
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GSVar: Make `KeepFastq` of NovaSeqX SampleSheet export configurable in settings #529

Closed BeneKenobi closed 1 month ago

BeneKenobi commented 3 months ago

We only archive BAM/CRAM files thus we do not need intermediate FastQs. Please make this option configurable to save some precious disk space. 😉

https://github.com/imgag/ngs-bits/blob/554919ea577fa225a05c815bc0bf567909f66927/src/cppNGSD/NGSD.cpp#L5644

leonschuetz commented 3 months ago

started implementaion in https://github.com/imgag/ngs-bits/tree/Samplesheet_extension

leonschuetz commented 1 month ago

inplemented in 9ac31bb21b31e362666844698fb22997cb892018, parameter can be set in the settings.ini