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imgag / ngs-bits

Short-read sequencing tools
MIT License
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src/GSvar/RepeatExpansionWidget.*: added support for Straglr #548

Closed leonschuetz closed 1 month ago

leonschuetz commented 1 month ago

src/NGSDAddVariantsGermline/main.cpp: added support for Straglr

src/cppNGSD/FileLocation*: added support for repeat files/images created by Straglr/StraglrOn

src/cppNGSD/NGSD.cpp: added support for repeat files/images created by Straglr/StraglrOn

src/cppNGSD/resources/NGSD_schema.sql: added column for RE lrGS cutoffs

src/tools-TEST/NGSDAddVariantsGermline_Test.h: added test for importing Straglr REs