Update dependent projects. - Githubissues

imglib / imglib2-ij

Translation between ImgLib & ImageJ data structures (both 1.x and 2)

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Update dependent projects. #38

Open tpietzsch opened 9 months ago

tpietzsch commented 9 months ago

[ ] Release a version of imglib2-ij with everything under package net.imglib2.ij.
[ ] Identify dependent projects.
[ ] For each dependent project: Use new imglib2-ij version in POM
[ ] For each dependent project: Update package for all occurrences of imglib2-ij classes.
[ ] For each dependent project: Create PR
[ ] Track PR progress until new imglib2-ij version can be propagated to pom-scijava

tpietzsch commented 9 months ago

Using the utilities from https://github.com/imglib/modularization, the following repositories were found to use classes from imglib2-ij:

https://github.com/imagej/imagej-legacy https://github.com/imglib/imglib2-algorithm https://github.com/imglib/imglib2-ij https://github.com/fiji/Colocalisation_Analysis https://github.com/fiji/FilamentDetector https://github.com/fiji/Graph_Cut https://github.com/fiji/Image_Expression_Parser https://github.com/fiji/Kappa https://github.com/fiji/SPIM_Registration https://github.com/fiji/Stitching https://github.com/fiji/Trainable_Segmentation https://github.com/fiji/blockmatching https://github.com/fiji/legacy-imglib1 https://github.com/saalfeldlab/bigwarp https://github.com/saalfeldlab/z-spacing https://github.com/bigdataviewer/bigdataviewer_fiji https://github.com/trackmate-sc/TrackMate https://github.com/trackmate-sc/TrackMate-Cellpose https://github.com/trackmate-sc/TrackMate-Ilastik https://github.com/trackmate-sc/TrackMate-MorphoLibJ https://github.com/trackmate-sc/TrackMate-Oneat https://github.com/trackmate-sc/TrackMate-Skeleton https://github.com/trackmate-sc/TrackMate-StarDist https://github.com/trackmate-sc/TrackMate-Weka https://github.com/trakem2/TrakEM2 https://github.com/saalfeldlab/n5 https://github.com/saalfeldlab/n5-ij https://github.com/saalfeldlab/n5-viewer https://github.com/PreibischLab/BigStitcher https://github.com/PreibischLab/multiview-reconstruction https://github.com/PreibischLab/multiview-simulation https://github.com/morphonets/SNT https://github.com/fiji/MaMuT https://github.com/juglab/labkit-pixel-classification https://github.com/juglab/labkit-ui