Autogenerate commandline reference documentation with Sphinx

immcantation / presto

pRESTO is part of the Immcantation analysis framework for Adaptive Immune Receptor Repertoire sequencing (AIRR-seq). pRESTO is a bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.

https://presto.readthedocs.io

GNU Affero General Public License v3.0

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Autogenerate commandline reference documentation with Sphinx #7

Closed ssnn-airr closed 9 years ago

ssnn-airr commented 9 years ago

Original report by Jason Vander Heiden (Bitbucket: javh, GitHub: javh).

Try one of:
https://github.com/ribozz/sphinx-argparse
https://pythonhosted.org/sphinxcontrib-autoprogram

ssnn-airr commented 9 years ago

Original comment by Jason Vander Heiden (Bitbucket: javh, GitHub: javh).

Done. Used sphinx-argparse.