Add U to T character mapping in scoring functions

immcantation / presto

pRESTO is part of the Immcantation analysis framework for Adaptive Immune Receptor Repertoire sequencing (AIRR-seq). pRESTO is a bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.

https://presto.readthedocs.io

GNU Affero General Public License v3.0

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Add U to T character mapping in scoring functions #88

Closed ssnn-airr closed 2 years ago

ssnn-airr commented 2 years ago

Original report by Jason Vander Heiden (Bitbucket: javh, GitHub: javh).

Might as well add U=T to the various DNA scoring and translation functions in presto.Sequence (Sequence.scoreDNA and friends).

ssnn-airr commented 2 years ago

Original comment by Jason Vander Heiden (Bitbucket: javh, GitHub: javh).

Done in 7b04b45.