pRESTO is part of the Immcantation analysis framework for Adaptive Immune Receptor Repertoire sequencing (AIRR-seq). pRESTO is a bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.
@javh sorry for bothering about pRESTO, but I really could not find the reason why the new unit test I created is failing and I thought maybe you have some ideas.
I tried implementing a barcode_length parameter to be able to extract specific positions as UMI barcodes with MaskPrimers.
It seems to be working fine but the new test I generated is failing though with :
@javh sorry for bothering about pRESTO, but I really could not find the reason why the new unit test I created is failing and I thought maybe you have some ideas.
I tried implementing a
barcode_length
parameter to be able to extract specific positions as UMI barcodes withMaskPrimers
.It seems to be working fine but the new test I generated is failing though with :
And I can't figure out why it is not parsing the
SEQ
as well for this test as I defined it the same way as the other tests.